petab.composite_problem

PEtab problems consisting of multiple models

Classes

CompositeProblem(parameter_df, problems) Representation of a PEtab problem consisting of multiple models
class petab.composite_problem.CompositeProblem(parameter_df: pandas.core.frame.DataFrame = None, problems: List[petab.problem.Problem] = None)

Bases: object

Representation of a PEtab problem consisting of multiple models

problems

List petab.Problems

parameter_df

PEtab parameter DataFrame

static from_yaml(yaml_config: Union[Dict[KT, VT], str]) → petab.composite_problem.CompositeProblem

Create from YAML file

Factory method to create a CompositeProblem instance from a PEtab YAML config file

Parameters:yaml_config – PEtab configuration as dictionary or YAML file name