petab.visualize.data_overview¶
Functions for creating an overview report of a PEtab problem
Functions
create_report (problem, model_name) |
Create an HTML overview data / model overview report |
get_data_per_observable (measurement_df) |
Get table with number of data points per observable and condition |
main () |
Data overview generation with example data from the repository for testing |
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petab.visualize.data_overview.
create_report
(problem: petab.problem.Problem, model_name: str) → None¶ Create an HTML overview data / model overview report
Parameters: - problem – PEtab problem
- model_name – Name of the model, used for file name for report
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petab.visualize.data_overview.
get_data_per_observable
(measurement_df: pandas.core.frame.DataFrame) → pandas.core.frame.DataFrame¶ Get table with number of data points per observable and condition
Parameters: measurement_df – PEtab measurement data frame Returns: Pivot table with number of data points per observable and condition Return type: data_per_observable
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petab.visualize.data_overview.
main
()¶ Data overview generation with example data from the repository for testing